17. Publications & bibliography


Edwin G. Conklin. Mosaic development in ascidian eggs. Journal of Experimental Zoology, 2(2):145–223, 1905. URL: https://onlinelibrary.wiley.com/doi/abs/10.1002/jez.1400020202, arXiv:https://onlinelibrary.wiley.com/doi/pdf/10.1002/jez.1400020202, doi:10.1002/jez.1400020202.


Edwin Grant Conklin. The organization and cell-lineage of the ascidian egg / by Edwin G. Conklin. Philadelphia :[Academy of Natural Sciences],, 1905. URL: http://www.biodiversitylibrary.org/item/24005.


R. Fernandez, Pradeep Das, V. Mirabet, E. Moscardi, Jan Traas, J.-L. Verdeil, Grégoire Malandain, and Christophe Godin. Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution. Nature Methods, 7:547–553, 2010. URL: https://hal.archives-ouvertes.fr/hal-00521491.


Léo Guignard. Quantitative analysis of animal morphogenesis: from high-throughput laser imaging to 4D virtual embryo in ascidians. Theses, Université Montpellier, December 2015. URL: https://tel.archives-ouvertes.fr/tel-01278725.


Léo Guignard, Ulla-Maj Fiuza, Bruno Leggio, Emmanuel Faure, Julien Laussu, Lars Hufnagel, Grégoire Malandain, Christophe Godin, and Patrick Lemaire. Contact-dependent cell-cell communications drive morphological invariance during ascidian embryogenesis. working paper or preprint, November 2018. URL: https://hal.archives-ouvertes.fr/hal-01938126, doi:10.1101/238741.


Léo Guignard, Ulla-Maj Fiuza, Bruno Leggio, Julien Laussu, Emmanuel Faure, Gaël Michelin, Kilian Biasuz, Lars Hufnagel, Grégoire Malandain, Christophe Godin, and Patrick Lemaire. Contact area-dependent cell communication and the morphological invariance of ascidian embryogenesis. Science, July 2020. URL: https://hal.inria.fr/hal-02903409, doi:10.1126/science.aar5663.


P. Màrquez-Neila, L. Baumela, and L. Alvarez. A morphological approach to curvature-based evolution of curves and surfaces. IEEE Transactions on Pattern Analysis and Machine Intelligence, 36(1):2–17, Jan 2014. doi:10.1109/TPAMI.2013.106.


Gaël Michelin. Image analysis tools and inter-individual registration for the study of animal and plant morphogenesis. Theses, Université Côte d'Azur, October 2016. URL: https://tel.archives-ouvertes.fr/tel-01451608.


Gaël Michelin, Léo Guignard, Ulla-Maj Fiuza, and Grégoire Malandain. Embryo Cell Membranes Reconstruction by Tensor Voting. In ISBI - International Symposium on Biomedical Imaging. Beijing, China, April 2014. IEEE. URL: https://hal.inria.fr/hal-00915000, doi:10.1109/ISBI.2014.6868105.


Nobuyuki Otsu. A threshold selection method from gray-level histograms. IEEE Trans. Sys., Man., Cyber., 9(1):62–66, 1979. doi:10.1109/TSMC.1979.4310076.